Tools, tutorials, and resources associated with the SPOCTT initiative (Scientific and Public Outreach of Cell Type Taxonomies)

A repository to organize data models and code for creating a pilot common connectivity matrix for BRAIN CONNECTS

An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

spatial transcriptomics analysis

Primer and examples for using templates and atlases in HMBA/BICAN

Repository for HIVE Education materials and tutorials

Tools for accessing and processing raw ephys data, compatible with data in the cloud.

Tools for Neuropixels probe insertion into SHIELD implants: providing suggested targets, recording actual insertions, storing notes.

Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.